{"author_name":"Jennifer Hillman-Jackson, Garima Singh","author_url":"https://galaxy.training","description":"Sometimes input errors are caused because of non-sorted inputs. Try using these: - **Picard SortSam:** Sort SAM/BAM by coordinate or queryname. - **Samtools Sort:** Alternate for SAM/BAM, best when used for coordinate sorting only. - **SortBED order the intervals:** Best choice for BED/Interval. - **Sort data in ascending or descending order:** Alternate choice for Tabular/BED/Interval/GTF. - **VCFsort:** Best choice for VFC. - **Tool Form Options for Sorting:** Some tools have an option to sort inputs during job execution. Whenever possible, sort inputs before using tools, especially if jobs fail for not having enough memory resources.","height":400,"html":"<iframe width=\"560\" height=\"400\" scrolling=\"yes\" sandbox=\"allow-same-origin allow-scripts\" title=\"FAQ: Sorting Tools\" src=\"https://training.galaxyproject.org/training-material/faqs/galaxy/tools_sorting.html?utm_source=galaxy-help&utm_medium=oembed&utm_campaign=oembed\" frameborder=\"0\" allowfullscreen></iframe>","provider_name":"Galaxy Training Network (GTN)","provider_url":"https://galaxy.training","thumbnail_height":400,"thumbnail_url":"https://training.galaxyproject.org/training-material/assets/images/GTNLogo1000.png","thumbnail_width":560,"title":"FAQ: Sorting Tools","type":"video","version":"1.0","width":560}